BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB012B05LP1|AL426317
(787 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1334 1542 0.0
>3x_Contig1334
Length = 7302
Score = 1542 bits (777), Expect = 0.0
Identities = 784/787 (99%)
Strand = Plus / Plus
Query: 1 taccatatttcacaagtatacctacaagagtcaggtaccaagatcgtatattgaggatga 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 3785 taccatatttcacaagtatacctacaagagtcaggtaccaagatcgtatattgaaaatga 3844
Query: 61 ctgtttccgaagtatcatcatcatccacaaagagaacattatcatactgaaagcgtgggt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3845 ctgtttccgaagtatcatcatcatccacaaagagaacattatcatactgaaagcgtgggt 3904
Query: 121 cggatatcattttggtccgtattggttgtatgcacyacgtttttatacatattatacaat 180
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 3905 cggatatcattttggtccgtattggttgtatgcactacgtttttatacatattatacaat 3964
Query: 181 gttacttactagctggtgtctttttttctcagttcctttaggttaattaacgatttcctt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3965 gttacttactagctggtgtctttttttctcagttcctttaggttaattaacgatttcctt 4024
Query: 241 tatgctttgatgaggttgctcaatgacaagcactttattccactgagaggattggcatct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4025 tatgctttgatgaggttgctcaatgacaagcactttattccactgagaggattggcatct 4084
Query: 301 ttgtccatgtaatttattgctcttgatcaggaatataaaccaattaaaccgggtcaatca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4085 ttgtccatgtaatttattgctcttgatcaggaatataaaccaattaaaccgggtcaatca 4144
Query: 361 tcaggttatgtcagagccttgcgcaaatctctaatggaaattcattttgcttctcaatta 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4145 tcaggttatgtcagagccttgcgcaaatctctaatggaaattcattttgcttctcaatta 4204
Query: 421 aaaggaagagtattctcgaaggatttagtcatactactctaacaccaacaaacaggaaga 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4205 aaaggaagagtattctcgaaggatttagtcatactactctaacaccaacaaacaggaaga 4264
Query: 481 cacagttattttaaccttagaaagacatttacaagggtcgaagatagtcagttgtcaatg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4265 cacagttattttaaccttagaaagacatttacaagggtcgaagatagtcagttgtcaatg 4324
Query: 541 tctgttctactaaatcaatttgaacagcctgttggtaaaccaatatacgattggactgta 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4325 tctgttctactaaatcaatttgaacagcctgttggtaaaccaatatacgattggactgta 4384
Query: 601 agaaaacttcctgaggatattgtggtccatggtgaacattgtctagtcgaatctcttgat 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4385 agaaaacttcctgaggatattgtggtccatggtgaacattgtctagtcgaatctcttgat 4444
Query: 661 gttaacaaacatgcagaggatctttttaaagcttataatgcttctccggactctatttgg 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4445 gttaacaaacatgcagaggatctttttaaagcttataatgcttctccggactctatttgg 4504
Query: 721 acgtaccttccctctgaaccccgtcgcacgttcagtgaattgaaaggttatctcgaaggt 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4505 acgtaccttccctctgaaccccgtcgcacgttcagtgaattgaaaggttatctcgaaggt 4564
Query: 781 cttgcca 787
|||||||
Sbjct: 4565 cttgcca 4571
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5901
Number of Sequences: 1807
Number of extensions: 5901
Number of successful extensions: 37
Number of sequences better than 1.0e-20: 1
length of query: 787
length of database: 10,358,551
effective HSP length: 16
effective length of query: 771
effective length of database: 10,329,639
effective search space: 7964151669
effective search space used: 7964151669
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)